Experimental Techniques in Systems Biology (Free Participation)

This course is part of the Level Up project which is fully funded by the European Commission.

“Systems biology is about putting together rather simple pieces to understand much more complicated things.” Leroy Hood

What is Systems Biology and what techniques can you apply to better understand it?

The course aims to introduce students to the fundamentals of modern techniques used in Systems Biology, a discipline that aims to understand a biological system as a whole and not merely its individual components. A deeper and wider understanding into how cells respond to experimental perturbations can give important insight into various applications, from biotechnology to human disease.

Participants will be introduced to basic concepts of Systems Biology, but emphasis will also be put on modern techniques that are commonly being used in Systems Biology, such as mRNA sequencing, mass spectrometry-based proteomics, flow/mass cytometry, and live-cell imaging. These might range from genome-wide coverage to single molecule coverage, millions of cells to single cells, and single time points to frequently sampled time courses.

Upon the successful completion of the course, students will be able to comprehend the basic terms used in systems biology; describe modern laboratory approaches based on ‘-omics’ methods and their importance in identifying key factors in the development of a phenotype/disease; integrate the ‘-omics’ results into a meaningful whole and define the global model of biological processes responsible for the development of a phenotype/disease; learn about the usage of Systems Biology experimental methodologies in early diagnosis, prognosis and/or drug development.

  • Basic terms used in systems biology
  • Modern laboratory approaches based on ‘-omics’ methods and their importance in identifying key factors in the development of a phenotype/disease
  • Integration of the ‘-omics’ results into a meaningful whole and define the global model of biological processes responsible for the development of a phenotype/disease
  • Usage of Systems Biology experimental methodologies in early diagnosis, prognosis and/or drug development.
  1. Biological systems
  2. The systems biology loop - Distinctive features of systems biology experiments - Important features of any experiment
  3. Models in systems biology - Basal perturbations & nucleic acid measurements - Single cells - Measuring proteins and protein states
  4. Three generations of sequencing
  5. Mass spectrometry – Quantification in proteomics
  6. The human disease network - disease gene co-morbidity
  7. From model predictions to experiments
  8. Systems pharmacology and therapeutics
  9. Network properties of biological networks - Types of biological networks
  10. Enrichment analysis

Healthcare, Medical & Life Sciences

Prof. Apostolos Zaravinos

Professor of Cancer Genetics and coordinator of the program “BSc in Biological Sciences” in the Department of Life Sciences at the European University Cyprus

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This course is for postgraduate students and professionals in the fields of Biology Biomedical Sciences as well as Computational Biologists. A BSc in Biology (background in Cell and Molecular Biology) and knowledge of basic statistics are required for this course.

01/11/2023 - 03/01/2024

Experimental Techniques in Systems Biology (Free Participation)

Language: English
Mode of study: Online Asynchronous
Starting Date: 1st of November, 2023
Duration: 2 months
Prerequisites: None

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